Stella inattivaStella inattivaStella inattivaStella inattivaStella inattiva
 

Pubblicazioni

 

Progetti Chiusi

(Closed)

 

Abc ° Acustics ° Anderson Attack ° Aqua ° Bealf ° BraTS ° CAS ° Chess ° Climate ° Constellation ° Correlizer ° CSG ° DG Putra ° DistribuitedDataMining ° Docking ° Drugdiscovery ° Edges ° EoN2 ° Extremadura ° Feynman ° Find/Fight Malaria ° Genome ° Hep ° Hydrogen ° Ibercivis ° Lattice ° Leiden ° MalariaControl ° Magnetism ° NanoHive ° NetMax ° Neurona ° Nrg ° Oproject ° Optima ° Orbit ° Physiome ° Poem ° Pogs ° Predictor ° Primaboinca ° Proteins ° PucBi ° Rectilinear Crossing Number ° RenderFarm ° RiojaScience ° Sat ° ScreensaverLifeSaver ° Simap ° Spinhenge ° SuperLink ° Sztaki ° Tampaku ° Terrain ° Ufluids ° Uspex ° VGTU ° Virtual Prairie ° Volpex ° VRS

 

 

 

abc

ABC@Home

 

Martin G., Miao W. - "ABC Triples". Arxiv, 2014. Link

Palenstijn W.J. - "Enumerating ABC Triples". DIAMANT/EIDMA Symposium, 2010. Link

 


 

Acustics@Home

 

Zaikin O., Petrov P. et al. - "Application of BOINC-based volunteer computing for comparison of the geoacoustic inversion algorithms efficiency". Grid 2018. Link

Zaikin O., Petrov P. et al. - "A Volunteer Computing Project for Solving Geoacoustic Inversion Problems". Open Engineering 7(1), 2017. Link

Zaikin O., Petrov P. et al. - "A GPU-enabled Black-box Optimization in Application to Dispersion-based Geoacoustic Inversion". Optima 2017. Link

Petrov P., Zaikin O. - "Application of iterative hill climbing to the sound speed profile inversion in underwater acoustics". IOP Conference on Materials, 2017. Link

Petrov P., Zaikin O. - "High-Performance Computing in the study on the Accurancy of the bottom Parameters Reconstruction using two different Fitness Functions". Proc of UACE 2017. Link

Zaikin O., Petrov P. et al. - "Using Volunteer Computing for Sound Speed Profile Estimation in Underwater Acoustics". Proceeding of Boinc:Fast 2017. Link

 

 


SU/UP

AndersonAttack

 

Bulavintsev V., Zaikin O., Semenov A. - "A Bitslice Implementation of Anderson’s Attack on A5/1". Open Engin 8, 2017. Link

Bulavintsev V., Zaikin O., Semenov A. - "Implementation of a Brute Force Attack on the A5/1 Keystream Generator in a GPU - based Volunteer Computing Project". Proceeding of Boinc:Fast 2017. Link

Bulavintsev V., Zaikin O., Semenov A. - "Volunteer-computing-based implementation of the Anderson attack on the stream cipher A5/1". 5th Conf Nation Supercomp, 2016. (In Press)

 


SU/UP

 

aqua

Aqua@Home

 

--2011--

Karimi K., Dickson N., Hamze F. - "High-Performance Physics Simulations Using Multi-Core CPUs and GPGPUs in a Volunteer Computing Context". J of High Perform Comp Applic 24(1), 2011. Link

Dickson N., Karimi K. et al. - "Importance of Explicit Vectorization for CPU and GPU Software Performance". Journal of Computational Physics 230(13), 2011. Link

Karimi K. et al. - "Investigating the Performance of an Adiabatic Quantum Optimization Processor". Quantum Information Processing, 2011. Link

--2010--

Hamze F., Dickson N., Karimi K. - "Robust Parameter Selection for Parallel Tempering". International Journal of Modern Physics C 21(5), 2010. Link

 


Bealf

Lukasz Swierczewski - "Testing Beal conjecture using supercomputers and distributed computing platform BOINC". Master Thesis, 2015. Link

 


SU/UP

 

BraTS@Home

 

Coss R. - "Weak Shear Study of Galaxy Clusters by Simulated Gravitational Lensing". Phd Thesis, 2010. Link

Coss R., Flores R. - "Gravitational Lensing Shear Simulations Using Fast Fourier Transform". NASA Missouri Space Grant Consortium, 2009. Link

Coss R., Flores R. - "BRaTS@Home and BOINC Distributed Computing for Parallel Computation". American Astronomical Society 40, 2008. Link

 


cas

Cas@home

 

Protein Structure + High Energy Physics + Nanotechnologies + Project Infrastructure

 

Protein Structure

--2015--

Bu D. - "TreeThreader - Predicting protein structure by using cloud computing". Conference Open Science at the Global Scale: Sharing e-Infrastructures, Sharing Knowledge, Sharing Progress, 2015. Link

--2014--

Legrand A. - "Replication and redundancy in Boinc - Cas@Home case". 10th Boinc Workshop, 2014. Link

--2013--

Wenjing W., Chen G. - "Harness public computing resources for protein structure prediction computing". Inter Sympos on Grid and Clouds, 2013. Link

Wenjing W. - "Cas@Home Status". The 9th BOINC Workshop, 2013. Link

--2011--

Shao M., Wang S., Wang C., Yuan X. et al. - "Research Incorporating Ab Initio energy into threading approaches for protein structure prediction". BMC Bioinformatics 12(1), 2011. Link

 

High Energy Physic

--2016--

Kan W. - "Enabling volunteer computing for the BESIII Simulation system". CHEP 2016. Link

--2011--

Wenjing W. - "Port Boss on CAS". CERN OpenLab 2011. Link

--2010--

Wu J. - "BOSS and LHC computing using CernVM and BOINC". CERN OpenLab 2010. Link

 

Nanotechnologies

--2012--

Wan Y. - "Make full use of free computing resources: An introduction of how to run a LAMMPS job on CAS@home". Group Meeting Scheduled Tsinghua University, 2012. Link

 

Project Infrastucture

Wu W. - "Port BOSS on Cas", IHEP-CC, 2011. Link

 


SU/UP

 

Chess@Home

Jeannot E., Kondo D. - "Distributing Chess Computation for Desktop GRID". ALEAE Meeting, 2010. Link

Yi S., Jeannot E. - "Distributed Chess AI Computation through RT-BOINC". 3rd ALEAE Meeting, 2009. Link


SU/UP

climatehome

Climate@Home

 

--2013--

Li J., Li Z. et al. - "Cloud-Enabled Climate@Home". Spatial Cloud Computing: A practical Approach Book, 2013. Link

--2011--

Yang C., Bambacus M., Freeman S. et al. - "A Computing Infrastructure for Supporting Climate Studies". American Geophysical Union Meeting, 2011. Link

Xu C., Yang C., Bambacus M. et al. - "Climate@Home: Crowdsourcing Climate Change Research". American Geophysical Union Meeting, 2011. Link

--2010--

Freeman S., Boller R.A., Yang C. et al. - "Using an Open-Source Grid Framework and Virtualization for Embarrassingly Parallel Computations". American Geophysical Union Meeting, 2010. Link

Sun M., Li J., Huang Q. - "Be a Citizen Scientist for Climate Change". GIS Days, 2010. Link


SU/UP

constellation

Constellation@Home

 

--2015--

Hornig A., Birkeland R. et al. - "Opportunities of an open-source global senso network monitoring the radio spectrum for the (new) space community". 66th Internat. Astronautical Congress, 2015. Link

Hornig A., Homeister M. - "TYCHO: Demonstrator and operational satellite mission to Earth–Moon-Libration point EML-4 for communication relay provision as a service". Acta Astronautica 108, 2015. Link

--2013--

Hornig A., Eversmeyer T., Beyermann U. - "Distributed Ground Station Network - a global system for tracking and communication with small satellites as an open service". 64th International Astronautical Congress, 2013. Link

--2011--

Hornig A. - "Building a Distributed Satellite Ground Station Network - A Call To Arms". 28th Chaos Communication Congress, 2011. Link

Hornig A. - "Constellation Platform - A distributed super-computer for aerospace science". Poster at 6th OpenFOAM Workshop, 2011. Link

 


SU/UP

 correlizer

Correlizer

 

--2019--

Knoch T.A. - "Simulation of different three-dimensional polymer models of interphase chromosomes compared to experiments–an evaluation and review framework of the 3D genome organization". Seminars in Cell & Devel Biol 90, 2019. Link

--2018--

Knoch T.A. - "A Guided Protocol for Array Based T2C: A High-Quality Selective High-Resolution High-Throughput Chromosome Interaction Capture". Current Protoc in Human Genetics 99(1), 2018. Link

--2016--

Knoch T.A., Abuseiris A. et al. - "The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes". Epigenetics Chromatine 9, 2016. Link

--2010--

Abuseiris A., Emmen A., Knoch T.A. - "Porting and Use of “Correlizer” to Investigate DNA Sequence Correlations". 3rd Almeregrid Desktop Experience, 2010. Link

--2009--

Knoch T.A., Göker M. et al. - "Fine-structured multi-scaling long-range correlations in completely sequenced genomes—features, origin, and classification". Eur. Biophys. J., 2009. Link

--2008--

Knoch T.A., Baumgartner V. et al. - "Large-Scale Resource Sharing at Public Funded Organizations". 4th International Conference on e-Social Science, 2008. Link


CSG

 

Dna + Wildlife + SubNetSum + Climate Tweet

 

Progetto DNA

--2015--

Zarns K, Desell T., Nechaev S., Dhasarathy A. - "Searching the Human Genome for Snail and Slug With DNA@Home". EScience Conference, 2015. Link

--2012--

Desell T., Newberg L.A., Szymanski B.K. et al. - "DNA@Home: Using Volunteered Computers for Finding Transcription Factor Binding Sites". 2nd Intern Congr on Comput Applic and Comput Science vol. 144, 2012. Link

--2011--

Desell T., Newberg L.A., Szymanski B.K. et al. - "Finding Protein Binding Sites Using Volunteer Computing Grids". 2nd International Congress on Computer Appl and Comput Science (CACS 2011). Link

 

Progetto Wildlife

--2019--

Bowley C., Mattingly M. et al. - "An analysis of altitude, citizen science and a convolutional neural network feedback loop on object detection in Unmanned Aerial Systems". J of Comput Syst 34, 2019. Link

--2018--

Bowley C., Mattingly M. et al. - "Detecting Wildlife in Unmanned Aerial Systems Imagery Using Convolutional Neural Networks Trained with an Automated Feedback Loop". Intern Conf on Comput Science, 2018. Link

Desell T. - "Accelerating the evolution of convolutional neural networks with node-level mutations and epigenetic weight initialization". Genetic and Evol Comput Conf Companion GECCO, 2018. Link

--2017--

Desell T. - "Developing a Volunteer Computing Project to Evolve Convolutional Neural Networks and Their Hyperparameters". EScience Conf, 2017. Link

Bowley C, Barnas A., Desell T. et al. - "Toward Using Citizen Scientists to Drive Automated Ecological Object Detection in Aerial Imagery". EScience Conf, 2017. Link

Desell T. - "Large Scale Evolution of Convolutional Neural Networks Using Volunteer Computing". Gecco. Link

--2016--

Barnas A., Mattingly M., Desell T. et al. - "Developing a Citizen Science Web Portal for Manual and Automated Ecological Image Detection". 12th IEEE EScience. Link

Bowley C., Andes A., Desell T. et al. - "Detecting Wildlife in Uncontrolled Outdoor Video using Convolutional Neural Networks". 12th IEEE EScience. Link

--2015--

Goehner K., Desell T., Eckroad R. et al. - "A Comparison of Background Subtraction Algorithms for Detecting Avian Nesting Events in Uncontrolled Outdoor Video". EScience Conference. Link

Desell T., Goehner K., Andes A. et al. - "On the Effectiveness of Crowd Sourcing Avian Nesting Video Analysis at Wildlife@Home". Procedia Comput Science 51. Link

Palarski J., Conrad N. - "Predation and Parental Care at Blue-Winged Teal (Anas discors) Nests in North Dakota". The Wildlife Society's 22nd Conference. Link

Saul A., Eckroad R.A., Goehner K. et al. - "Effectiveness of Citizen Science vs Expert Observation in Classification of Nesting Bird Behaviors Captured on Camera". The Wildlife Society's 22nd Conference. Link

--2014--

Desell T., Ellis-Felege S.N. et al. - "A Bird’s Eye View of ... Birds. Combining Technology and Citizen Science for Conservation." The Wildlife Professional. Link

Goehner K, Desell T. - "Computer Vision to Aid in WIldlife Surveillance". The 2014 EPSCoR/IDeA Conference. Link

Desell T., Ellis-Felege S.N. et al. - "Wildlife@Home: Conservation Outreach Using Nest Cameras, Citizen Science and Computer vision". The North Dakota Chapter of the Wildlife Society Conference. Link

--2013--

Desell T., Marsh R., Goehner K. et al. - "Wildlife@Home: Combining Crowd Sourcing and Volunteer Computing to Analyze Avian Nesting Video". 9th IEEE International Conf on E-Science. Link

 

Progetto SubnetSum

 

O'Neil T., Desell T. - "Empirical Support for the High-Density Subset Sum Decision Threshold". 14th IEEE Canadian Workshop on Information Theory (CWIT'15), 2015. Link

 

Progetto Climate Tweets

Kirilenko A.P., Desell T. et al. - "Crowdsourcing Analysis of Twitter Data on Climate Change: Paid Workers vs. Volunteers". Sustainability 9(11), 2017. Link

 


 

DG Putra

Sjaugi M.F., Latip R. et al. - "DG@PUTRA : An experience in integrating desktop and service grid at University Putra Malaysia". Edges Seminaries, 2012. Link

 


SU/UP

 

 distrdatamin

Distribuited Data Mining

 

--2013--

Schlitter N., Falkowski T., Lässig J. - "DenGraph-HO: a density-based hierarchical graph clustering algorithm". Expert Systems 31(5), 2013. Link

Schlitter N. - "Distributed Data Analytics using RapidMiner and BOINC". Rapidminer International Conference, 2013. Link

--2011--

Schlitter N., Falkowski T., Lässig J. - "DenGraph-HO: Density-based Hierarchical Community Detection for Explorative Visual Network Analysis". 31st SGAI International Conference on Innovative Techniques and Applications of Artificial Int., 2011. Link

Voigt D., Eysholdt U. - "Identifying relevant analysis parameters for the classification of vocal fold dynamics". Journ of Acustic Society of America 130(4), 2011. Link

--2010--

Voigt D., Lohscheller J., Döllinger M., Yang A., Eysholdt U. - "Automatic diagnosis of vocal fold paresis by employing phonovibrogram features and machine learning methods". Comput. Methods Programs Biomed. 99(3), 2010. Link

Voigt D., Döllinger M. et al. - "Classification of functional voice disorders based on phonovibrograms". Artificial Intelligence Medicine 49(1), 2010. Link

Voigt D. - "Objective Analysis and Classification of Vocal Fold Dynamics from Laryngeal High-Speed Recordings". Kommunikationsstorungen - Berichte Aus Phoniatrie Und Padaudiologie Book, 2010. Link

--2009--

Falkowski T. - "Community Analysis in Dynamic Social Networks", 2009. Link

Schlitter N., Falkowski T. - "Mining the Dynamics of Music Preferences from a Social Networking Site". International Conference on Advances in Social Network Analysis and Mining, IEEE Computer Society, 2009. Link

Falkowski T. - "Community Analysis in Dynamic Social Networks". Goettingen: Sierke Verlag; 2009. Link

--2008--

Falkowski T., Schlitter N. - "Analyzing the Music Listening Behavior and its Temporal Dynamics Using Data from a Social Networking Site", 2008. Link

Schlitter N. A. - "Case Study of Time Series Forecasting with Backpropagation Networks". Fak. für Informatik; 2008. Link

 


SU/UP

docking

Docking@Home

 

2017 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2007 - 2006 - 2005 - 2004

 

--2017--

Zhang B., Estrada T., Cicotti P., Taufer M. et al. - "Enabling scalable and accurate clustering of distributed ligand geometries on supercomputers". Parallel Computing 63, 2017. Link

--2013--

Zhang B., Estrada T., Cicotti P., Taufer M. - "On efficiently capturing scientific properties in distributed Big Data without moving the data - A Case Study in Distributed Structural Biology using MapReduce". 16th IEEE International Conferences on Computational Science and Engineering, 2013. Link

Estrada T., Pusecker M., Torres M., Cohoon J., Taufer M. - "Benchmarking Gender Differences in Volunteer Computing Projects". 3rd Workshop on Analyzing and Improving Collaborative eScience with Social Networks (eSoN), 2013. Link

--2012--

Matheny M, Schlachter S., Crouse L., Kimmel E., Estrada T., Taufer M. et al. - "ExSciTecH: Expanding Volunteer Computing to Explore Science, Technology, and Health". 2nd workshop on Analyzing and Improving Collaborative eScience with Social Networks, 2012. Link

Estrada T.,Zhang B., Ciccotti P., Armen R., Taufer M. - "A scalable and accurate method for classifying protein-ligand binding geometries using a MapReduce approach". Computers in Biology and Medicine 42(7), 2012. Link

Estrada T.,Zhang B., Ciccotti P., Armen R., Taufer M. - "Reengineering high-throughput molecular datasets for scalable clustering using MapReduce". 14th IEEE International Conference on High Performance Computing and Communications, 2012. Link

--2011--

Rahaman O., Estrada T., Doren D., Taufer M., Brooks C.L., Armen R.S. - "Evaluation of Several Two-Step Scoring Functions Based on Linear Interaction Energy, Effective Ligand Size, and Empirical Pair Potentials for Prediction of Protein-Ligand Binding Geometry and Free Energy". J. Chem. Information and Modeling 51(9), 2011. Link

Estrada T. and Taufer M. - "Providing Application-Level Quality of Science in Volunteer Computing". 13th IEEE International Conference on High Performance Computing and Communications (HPCC-2011). Link

--2010--

Estrada T., R. Armen, Taufer M. - "Automatic Selection of Near-Native Protein-Ligand Conformations using a Hierarchical Clustering and Volunteer Computing". International Conference On Bioinformatics and Computational Biology (ACM-BCB),2010. Link

--2009--

Estrada T., Taufer M., Anderson D. - "Performance Prediction and Analysis of BOINC Projects: An Empirical Study with EmBOINC". Journal of Grid Computing 7(4), 2009. Link

Taufer M., Armen R.S., Chen J., Teller P.J., Brooks C.L. - "Computational Multi-Scale Modeling in Protein-Ligand Docking". IEEE Engineering in Medicine and Biology Magazine 28(2), 2009. Link

Atlas J., Estrada T., Decker K., Taufer M. - "Balancing Scientist Needs and Volunteer Preferences in Volunteer Computing using Constraint Optimization". International Conference on Computational Science (ICCS), 2009. Link

Estrada T., Reed K., Anderson D., Taufer M. - "EmBOINC: An Emulator for Performance Analysis of BOINC Projects". PCGrid Conferenze, 2009. Link

Estrada T., Reed K., Taufer M. - "Modeling Job Lifespan Delays in Volunteer Computing Projects". 9th IEEE International Symposium on Cluster Computing and Grid (CCGrid), 2009. Link

--2008--

Estrada T., Fuentes O., Taufer M. - "A Distributed Evolutionary Method to Design Scheduling Policies for Volunteer Computing". ACM Computing Frontiers, 2008. Link

--2007--

Lopez G., Taufer M., Teller P.J. - "Evaluation of IEEE 754 Floating-Point Arithmetic Compliance Across a Wide Range of Heterogeneous Computers". Richard Tapia Celebration of Diversity in Computing Conference, 2007. Link

Taufer M., Kerstens A., Estrada T., Flores D.A., Teller P.J. - "SimBA: a Discrete Event Simulator for Performance Prediction of Volunteer Computing Projects". International Workshop on Principles of Advanced and Distributed Simulation 2007 (PADS'07). Link

Taufer M., Kerstens A., Estrada T., Flores D.A., Zamudio R., et al. - "Moving Volunteer Computing towards Knowledge-Constructed, Dynamically-Adaptive Modeling and Scheduling". First Workshop on Large-Scale, Volatile Desktop Grids (PCGrid'07), 2007. Link

--2006--

Estrada T., Flores D.A., Taufer M., Teller P., Kerstens A., Anderson D. - "The Effectiveness of Threshold-based Scheduling Policies in BOINC Projects". 2st IEEE International Conference on e-Science and Grid Technologies,2006. Link

--2005--

Taufer M., Crowley M., Price D., Chien A.A., Brooks C.L. - "Study of an Accurate and Fast Protein-Ligand Docking Algorithm based on Molecular Dynamics". Concurrency and Computation: Practice and Experience. Volume 17, 2005. Link

Taufer M., Teller P.J, Anderson D., Brooks C.L. - "Metrics for Effective Resource Management in Global Computing Environments". 1st IEEE International Conference on e-Science and Grid Technologies, 2005. Link

Taufer M., Anderson D., Ciccotti P., Brooks C.L. - "Homogeneous Technique to Ensure Integrity of Molecular Simulation Results Using Public Resources". 14th Heterogeneous Computing Workshop, 2005. Link

--2004--

Taufer M., Crowley M., Price D., Chien A.A., Brooks C.L. - "Study of an Fast Protein-Ligand Docking Algorithm based on Molecular Dynamics". IEEE International Workshop on High Performance Computational Biology, 2004. Link

 

 


 

drugdiscovery

DrugDiscovery

 

Berishvili V., Voronkov A. et al. - "Machine Learning Classification Models to Improve the Docking-based Screening: A Case of PI3K-Tankyrase Inhibitors". Molecular Informatics 37(11), 2018. Link

Voronkov A., Shultz J. - "Drugdiscovery@home - distributed volunteer computing project in the fields of cancer, aging and stem cells". SENS Research Conference 4, 2009. Link

 


SU/UP

  edges

Edges@Home

 

Riguardanti l'infrastruttura Edges-Edgi (Concerning the Edges-Edgi infrastructure).

 

2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008

 

--2015--

Kacsuk P., Farkas Z., Marosi A. et al. - "Desktop grid in the era of Cloud Computing". Grid Computing: Techniques and Future Prospects, 2015. Link

Fedak G. - "Contributions to Desktop Grid". Phd Thesis, 2015. Link

--2014--

Horvath F., Ittzes P. - "Supporting environmental modelling with Taverna workflows, web services and desktop grid technology". 7th Inter Congr on Envirmen Modelling and Software, 2014. Link

Visegradi A., Kovacs J., Kasuk P. - " Efficient extension of gLite VOs with BOINC based desktop grids". Future Gen. Comp. Syst. 32, 2014. Link

--2013--

Marosi A., Kovacs J., Kacsuk P. - "Towards a volunteer cloud system". Future Generation Computer Systems 29(6), 2013. Link

Ponciano L., Brasileiro F. - "Assessing Green Strategies in Peer-to-Peer Opportunistic Grids". J. of Grid Computing 11(1), 2013. Link

Hanappe P. - "Latest developments on energy measurements". 9th Boinc Workshop, 2013. Link

Visegradi A. - "Random Linear Coding in Distributed Storage Systems". 9th Boinc Workshop, 2013. Link

Delamare S., Fedak G., Kondo D. et al. - "Advanced QoS Prototype for the EDGI Infrastructure". EDGI JRA2, 2013. Link

Delamare S., Fedak G., Kondo D. et al. - "Intermediate QoS Prototype for the EDGI Infrastructure". EDGI JRA2, 2013. Link

Delamare S., Fedak G., Kondo D. et al. - "SpeQuloS: a QoS service for hybrid and elastic computing infrastructures". Cluster Computing, 2013. Link

--2012--

Grunzke R., Birkenheuer G, Blunk D., Breuers S., Brinkmann A. et al. - "A Data Driven Science Gateway for Computational Workflows", UNICORE Summit 15, 2012. Link

Terstyanszky G., Kiss T., Kukla T., Lichtenberger Z., Winter S., Greenwell P. et al. - "Application Repository and Science Gateway for Running Molecular Docking and Dynamics Simulations". Stud. Health. Tech. Inform. 175, 2012. Link

Acs S., Kovacs J., Terstyanszky G. - "Application Repository based evaluation of the EDGI infrastructure", MIPRO Conference 2012. Link

Boychenko S., Araujo F. - "Benchmarking the EDGI Infrastructure", INForum 2012. Link

Kacsuk P., Marosi A. - "Supporting Web 2.0 communities by volunteer desktop grids". Desktop Grid Computing Book, 2012. Link

Kacsuk P., Marosi A. - "Towards Hybrid Desktop Grid and Cloud Infrastructures".Desktop Grid Computing Book, 2012. Link

Sottrup C.U., Kovacs J. - "Transparent execution of ARC jobs on Desktop Grid resources". MIPRO, 2012. Link

Kovacs J., Keller M., Araujo F. et al. - "Monitoring UNICORE jobs executed on Desktop Grid resources". MIPRO, 2012. Link

Terstyanszky G., Kiss T., Kukla T., Lichtenberger Z. et al. - "Application Repository and Science Gateway for Molecular Docking and Diynamic Simulations". Stud.Health Technol. Inform 175, 2012. Link

Terstyanszky G., Kiss T., Kukla T., Winter S. et al.- "Combining Desktop and Service Grids to support e-Scientists to run Simulations".  5th International Conference on Distributed Computing and Grid-technologies in Science and Education, 2012. Link

Lodygensky O., Urbah E., Dadoun S., Simonet A. et al. - "FlyingGrid : from Volunteer Computing to Volunteer Cloud". Computing in High Energy and Nuclear Physics, 2012. Link

Mohammadmersad G. - "Investigating Volunteer Computing for Simul8, a Feasibility Study". Operational Research Society Simulation Workshop 2012. Link

Kecskemeti G., Kertesz A., Marosi A. et al. - "Interoperable Resource Management for Establishing Federated Clouds". 2012. Link

Delamare S., Fedak G., Kondo D., Lodygensky O. - "SpeQuloS: A QoS Service for BoT Applications Using Best Effort Distributed Computing Infrastructures". High Performance and Distribuited Computing Conference, 2012. Link

--2011--

Taylor S.J.R, Ghorbani M.,Mustafee N. et al. - "Distributed Computing and Modelling and Simulation: Speeding up Simulations and Creating Large Models". Winter Simulation Conference, 2011. Link

Davoli E., Meyer N. et al. - "Edges bridge technologies to interconnect service and desktop grid". Remote instrument service on e-infrastructure Book, 2011. Link

Kovacs J., Marosi A.C., Kacsuk P. - "GBAC: Virtualization based execution environment for Desktop Grids". Cracov Grid Workshop, 2011. Link

Kacsuk P. - "How to make Boinc-Based desktop grids even more popular?". IEEE International Symposium on Parallel and Distribuited Processing, 2011. Link

Delamare S. - "Hybrid Distributed Computing Infrastructure Experiments in Grid5000: Supporting QoS in Desktop Grids with Cloud Resources". Grid5000 Spring School, 2011. Link

Keller M., Kovacs J., Brinkmann A. - "Desktop Grids Opening up to UNICORE". Unicore summit 2011. Link

Kacsuk P. - "Enable the use of BOINC for new communities - the IDGF experience". 7th Boinc Workshop, 2011. Link

Kelley I. - "Attic Data Distribution Framework". 7th Boinc Workshop, 2011. Link

Schott B., Emmen A. - "Green Desktop-Grids: Scientific Impact, Carbon Footprint, Power Usage Efficency". Scalable Computing:Practice and Experience 12(2), 2011. Link

Elwaer A., Harrison A., Kelley I., Taylor I. - "Attic: A Case Study for Distributing Data in BOINC Projects". IEEE International Symposium on Parallel and Distribuited Processing, 2011. Link

Reynolds C.J., Winter S., Kiss T. et al. - "Scientific Workflow Makespan Reduction Through Cloud Augmented Desktop Grids". IEEE Conference on Cloud Computing Tech and Science, 2011. Link

Kertesz A., Farkas Z., Kacsuk P. - "Multi-level Brokering Solution for Interoperating Service and Desktop Grids". Lectures in Computer Science 6586, 2011. Link

Lovas R. - "The first year of DEGISCO: hybrid infrastructure and new applications based on BOINC". 7th Boinc Workshop, 2011. Link

Marosi A, Kecskemeti G., Kertesz A., Kacsuk P. - "FCM: an Architecture for Integrating IaaS Cloud Systems". 2nd International Conference on Cloud Computing, Grids and Virtualization, 2011. Link

Kiss T., Kelley I., Kacsuk P. - "Porting Computation and Data Intensive Applications to Distributed Computing Infrastructures Incorporating Desktop Grids". International Symposium on Grids and Clouds, 2011. Link

Elwaer A., Taylor I., Rana O. - "Preference Driven Server Selection in Peer-2-Peer Data Sharing Systems". 4th International Workshop on Data-Intensive distribuited Computing, 2011. Link

Marosi A., Kacsuk P. - "Workers in the Clouds". 19th Euromicro International Conference on Parallel, Distribuited and Network-Base Processing, 2011. Link

Kacsuk P., Kovaks J. - "Towards a Powerful European DCI Based on Desktop Grids". J. of Grid Computing 9(2), 2011. Link

--2010--

Marosi A.C., Kacsuk P. - "Sandboxing for Desktop Grids Using Virtualization". Parallel, Distributed and Network-Based Processing Conference, 2010. Link

Delamare S., Fedak G., Kondd D, Lodygensky O. - "SpeQuloS: A QoS Service for Hybrid Distributed Computing Infrastructures". Cluster Computing, 2010. Link

Schott B., Emmen A. - "Green Methodologies in Desktop-Grid. An invitation for discussion by the DEGISCO Project". Intern. Multiconference on Computer Science, 2010. Link

Emmen A. - "Desktop Grids take their place in the e-Science distributed computing infrastructure". Proc. Cracow Grid Workshop, 2010. Link

Marosi A., Kovas A. et al. - "The BinSys application on the EDGeS infrastructure". 3rd Almeregrid Workshop, 2010. Link

Farkas Z. - "Improved 3G Bridge scalability to support desktop grid executions". 6th Boinc Workshop, 2010. Link

Marosi A. - "Remote validation of BOINC results – The Web2Grid project". 6th Boinc Workshop, 2010. Link

--2009--

Marosi A. - "Virtualization for Desktop Grid Clients". 5th Boinc Workshop, 2009. Link

Balaton Z. - "3G-Bridge: Bridging the Gap between BOINC and Other Systems". 5th Boinc Workshop, 2009. Link

Terstyanszky G., Kiss T. - "Porting applications to the Grid using the EDGeS Application Development". 25th Open Grid Forum Meeting, 2009. Link

Urbah E., Kacsuk P., Farkas Z. et al. - "EDGeS: Bridging EGEE to BOINC and XtremWeb". J of Grid Computing, 2009. Link

Farkas Z. - "SG-DG Bridges". CERN Middleware Security Group Meeting, 2009. Link

Urbah E. - "Specific security needs of Desktop Grids". CERN Middleware Security Group Meeting, 2009. Link

Ivaki N.R., Ferreira D., Araujo F - "Benckmarking the 3G-Bridge in the EDGeS Infrastructure". Proc. Cracow Grid Workshop, 2009. Link

Kovaks J. - "Programming Applications for Desktop Grids". EDGes Summer School, 2009. Link

--2008--

Kiss T. - "Porting applications for a combined EGEE/Desktop Grid platform in the framework of the EDGeS infrastructure". EEGE, 2008. Link

Urbah E. - "Why does EDGeS need OGF PGI?". EDGes FP7 Inititive, 2008. Link

 

Progetto "Mopac"

Brandmaier S., Srivstava V., Tetko I. et al. - "MOPAC@home - A Structural Database for small chemical compounds". 3th Almeregrid Desktop Conference, 2010. Link

 

Progetto "ISDEP"

Riverol A., Bustos A. et al. - "ISDEP, a fusion application deployed in the EDGeS project". 3rd AlmereGrid Desktop Experience Workshop, 2010. Link

 

Progetto "Slinca"

 

2014 - 2013 - 2012 - 2011 - 2010 - 2009

 

--2014--

Gordienko Y. - "Change of Scaling and Appearance of Scale-Free Size Distribution in Aggregation Kinetics by Additive Rules". Physica A: Statistical Model, 412, 2014. Link

--2013--

Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "From Quantity To Quality: Massive Molecular Dynamics Simulation of Nanostructures under Plastic Deformation".  Desktop and Service Grid Distributed Computing Infrastructure, Computer Science, 14, 2013. Link

--2012--

Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Application of Desktop Grid Technology in Material Science". 5th Distributed Computing and Grid-technologies in Science and Education, 2012. Link

--2011--

Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Statistical Properties of Deformed Single-Crystal Surface under Real-Time Video". Monitoring and Processing in the Desktop Grid Distributed Computing Environment, Key Engineering Materials 465, 2011. Link

--2010--

Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Porting Multiparametric MATLAB Application for Image and Video Processing to Desktop Grid for High-Performance Distributed Computing". International Conference of Supercomputer, 2010. Link

Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Kinetics of Defect Aggregation in Materials Science Simulated in Desktop Grid Computing Environment Installed in Ordinary Material Science Lab". 3rd Grid Experience Workshop - Desktop Grid Applications for eScience, 2010. Link

--2009--

Gatsenko O., Gordienko Y. - "Desktop Grid Computing in Materials Science Lab - Example of Development and Execution of Application for Defect Aggregation Simulations". Proc. Cracow Grid Conf, 2009. Link

 


Progetto "Autodock"

Kiss T., Szmetanko G. et al. - "Molecular Docking Simulations on a Combined Desktop and Service Grid Infrastructure". 3rd AlmereGrid Desktop Experience Workshop, 2010. Link

 


SU/UP

eon2

EoN2

 

--2014--

Chill S.T., Welborn M. et al. - "EON: software for long time simulations of atomic scale systems". Modell Simul Mater Sci Eng 22, 2014. Link

--2009--

Xu L., Mei D., Henkelman G., - "Adaptive kinetic Monte Carlo simulation of methanol decomposition on Cu(100)". Journal Chemical Phys. 131, 2009. Link

Pedersen N A., Henkelman G., Schiøtz J., Jónsson H. - "Long time scale simulation of a grain boundary in copper". Journal Phys. 11, 2009. Link

Mei D., Xu L., Henkelman G. - "Potential energy surface of methanol decomposition on Cu(110)". Journal Chemical Phys. C 113, 2009. Link

--2008--

Xu L., Henkelman G. - "Adaptive kinetic Monte Carlo for first-principles accelerated dynamics". Journal Chemical Phys. 129(11), 2008. Link

--2003--

Henkelman G., Jónsson H. - "Multiple time scale simulations of metal crystal growth reveal importance of multi-atom surface processes". Phys. Rev. Lett. 90(11), 2003. Link

 


SU/UP

 

Extremadura@Home

 

--2014--

Laredo J.L.J, Lombrana Gonzales D. et al. - "A Peer-to-Peer Approach to Genetic Programming". EuroGP 2014. Link

Laredo J.L.J., Bouvry P., Fernandez De Vega F. et al. - "Designing robust volunteer-based evolutionary algorithms". Genetic Programming and Evolvable Machines 15(1), 2014. Link

Fernandez De Vega F., Trujillo L. et al. - "A Hybrid ECJ+BOINC Tool for Distributed Evolutionary Algorithms". 2014. Link

--2010--

Lombrana Gonzales D., Fernandez De Vega F. et al. - "Characterizing fault tolerance in genetic programming". Future Generation Comp Syst. 26(6), 2010. Link

--2009--

Gonzalez D.L., De Vega F.F. et al. - "Increasing GP Computing Power for Free via Desktop GRID Computing and Virtualization". 17th Euromicro Inter. Confer. on Parallel, Distribuited and Network-base Processing, 2009. Link

--2008--

Lombrana Gonzales D., Fernandez De Vega F. et al. - "Increasing GP Computing Power via Volunteer Computing". PPSN 2008. Link

Lombrana Gonzales D., Fernandez De Vega F. et al. - "Interpreted Applications within BOINC Infrastructure". 2nd Ibergrid Conference, 2008. Link

--2007--

Cardenas Montes M., Vega-Rodriguez M.A. et al. - "Volunteer Computing, an Interesting Option for Grid Computing: Extremadura as Case Study". Lecture Notes in Computer Science 4805, 2007. Link

Chavez de la O F.; Rubio del Solar M. et al. - "A Genetic Programming infrastructure profiting from public computation resources". Spanish Conference on e-Science Grid Computing, 2007. Link

 


SU/UP

 

Feynman@Home

 

Perret-Gallix D. - "Simulate with Grace!". ASCFA Meeting, 2007. Link

 


SU/UP

 

Fight Malaria/Find@Home

 

--2014--

Jaafar H., Chubb A. et al. - "Visualization of a number of large datasets of compounds that have been tested for effectiveness against the Plasmodium Falciparum strain 3D7". Irish J. of Medical Science 183(12). Link

--2007--

Lavin P., Whelan N. - "Distributed biological screening through Volunteer Computing to find useful protein/drug matches for the purpose of malarial drug research". Degree of Master in Comput Science Univ of Dublin. Link


SU/UP

 

genome

Genome@Home

 

--2003--

Larson S.M., Desjarlais J.R., Pande V. - "Sequence optimization for native state stability determines the evolution and folding kinetics of a small protein". J of Molec Biol 332(1), 2003. Link

Larson S.M., Garg A., Desjarlais J.R., Pande V. - "Increased detection of structural templates using alignments of designed sequences". Proteins: Structure, Function, and Genetics 51(3), 2003. Link

Larson S.M., Snow C.D., Shirts M.R., Pande V. - "Folding@Home and Genome@Home: Using distributed computing to tackle previously intractable problems in computational biology." Computational Genomics, 2003. Link

--2002--

Larson S.M., England J.L., Desjarlais J.R., Pande V. - "Thoroughly sampling sequence space: large-scale protein design of structural ensembles". Protein Science 11(12), 2002. Link

Larson S.M. - "Identifying structural templates using alignments of designed sequences." SAC-CASP, 2002. Link

--2001--

Larson S.M. - "Folding@home and Genome@home: Protein folding and design with distributed computing." Carleton University Biochemistry & Chemistry Society, 2001. Link

 


SU/UP

 

Hep@Home

 

Amorin A., Villate J., Andrade P. - "HEP@Home - A distributed computing system based on BOINC". CHEP2004 on CERN Publications, 2004. Link

 


SU/UP

hydrogen

Hydrogen@Home

 

Shultz J. - "Modeling Biological Hydrogen Production". 4th Boinc Workshop, 2008. Link

 

 


 ibercivis

Ibercivis

Ibercivis infrastructure + Covid19 +Socientize + Amiloide + Bindsurf + Cells + Criticalidad + Cuanticables + Fusion+ Materiales + Neurosim + Prisioner Dilemma + Sanidad

 

Riguardanti l'infrastruttura Ibercivis

--2014--

Guerrero Hernandez G.D., Imbernon B. et al. - "A performance/cost evaluation for a GPU-based drug discovery application on volunteer computing". Biomed Research International, 2014. Link

--2011--

Ferred D. - "Boinc Balanced Multi Server Enviroment". 7th Boinc Workshop, 2011. Link

--2009--

Benito D., Castejon F., Castelo V. et al. - "Ibercivis: infrastructure, applications anddevelopment workflow". 3rd Ibergrid Conference, 2009. Link

--2008--

Rivero A. - "Ibercivis: status, configuration, and expectations". 4th Boinc Workshop, 2008. Link

--2007--

Antoli B., Castejon F., Giner A., Losilla G. et al. - "ZIVIS: A City Computing Platform Based on Volunteer Computing". 1st Ibergrid Conference, 2007. Link

 

Covid 19

De Salazar P.M., Ramos J. et al. - "Tenofovir and remdesivir ensemble docking with the SARS-CoV-2 polymerase and template-nascent RNA". Authorea, 2020. Link

 

Progetto "SOCIENTIZE"

--2016--

Silva C., Monteiro A.J., Manahl C. et al. - "Cell Spotting: Educational and Motivational Outcomes of Cell Biology Citizen Science Project in the Classroom". Journ of Science Communic 15(1). Link

--2015--

Serrano F. - "Green Paper on Citizen Science. Citizen Science for Europe: Towards a better society of empowered citizens and enhanced research". EU Conference. Link

Lostal E., Monteiro A.J. et al. -  "Citizen Science in Education: Students Becoming Cell Biology Researchers". Citizen Science Conference. Link

Monteiro A.J., Silva G.C., Villar J.C. - "Cell Spotting - let's figth cancer together". Science in School Journal 31. Link

Sagarra O., Gutierrez-Roig M. et al. - "Citizen Science practices for Computational Social Sciences research: The conceptualization of Pop-Up Experiments". Front. Phys. 3(93). Link

--2014--

Serrano F. - "White paper on citizen science for Europe". Socientize Conference. Link

Silva C.G., Brito R.M.M, Monteiro A. et al. - "SOCIENTIZE participatory experiments, dissemination and networking activities in perspective". Human Computation  1(2). Link

Ponciano L., Brasileiro F. - "Finding Volunteers’ Engagement Profiles in Human Computation for Citizen Science Projects". Human Comput 1(2). Link

--2013--

Serrano F., Brasileiro F. - "Semantics map application report". Link

Lostal E., Almonacid S. - "Cell Images Application Report".Link

 

 

Progetto "AMILOIDE"

--2017--

Jorge M. - "Predicting hydrophobic solvation by molecular simulation: 2. new united-atom model for alkanes, alkenes and alkynes". Computational Chemistry 38(6), 2017. Link

Jorge M., Simoes C.J.V., Garrido N.M et al. - "Predicting hydrophobic solvation by molecular simulation: 1. Testing united-atom alkane models". Computational Chemistry 38(6), 2017. Link

--2010--

Simoes C.J.V., Murkherjee T., Brito R.M. M., Jackson R.M. - "Toward the Discovery of Functional Transthyretin Amyloid Inhibitors: Application of Virtual Screening Methods",  J. Chem. Inf. Model. 50(10), 2010. Link

Simoes C.J.V., Riviero A., Brito R.M. M. - "Searching for Anti-Amyloid Drugs with the Help of Citizens: the ‘AMILOIDE’ Project on the IBERCIVIS Platform". ERCIM News 82, 2010. Link

Simoes C.J.V., Riviero A., Taracon A., Serrano S., et al. - "Running faster and further together: the AMILOIDE project, the onset of the Portuguese participation on the Ibercivis volunteer computing network". IBERGRID’10, 2010. Link

 

 

Progetto "BINDSURF"

--2014--

Guerrero G.D., Imbernon B., Sanz F. et al. - "A Performance/Cost Evaluation for a GPU-Based Drug Discovery Application on Volunteer Computing". BioMed Research International vol.2014, 2014. Link

 


Progetto "CELLS"

--2013--

Lostal Lanza E., Serrano Sanz F., Carrodeguas Villar J.A., Martinez Alonso P. et al. - "Cell Images Analysis as a Case of Citizen Science for Advanced Education: Laboratory and School, Back and Forth". 7th International Technology, Education and Development Conference (INTED13), 2013. Link

Lostal Lanza E., Serrano Sanz F., Carrodeguas Villar J.A. et al. - "A case of Citizen Science for Cell Biology Images Analysis". 33th Congresso da Sociedade Brasileira de Computação (CSBC 2013), 2013. Link

 


Progetto "CRITICALIDAD"

--2010--

Martinez-Mendoza A.J., Mendez-Bermudez J.A., Varga I. - "Conductance statistics for the power-law banded random matrix model", IV Mexican Meeting on Experimental and Theoretical Physics, AIP Conf. Proc. 1319, 2010. Link

 


Progetto "CUANTICABLES"

--2013--

Camjayi A., Arrachea L. - "Conductance of a quantum dot in the Kondo regime connected to dirty wires". Physical Review B 86, 235143 (2013). Link



Progetto "FUSION"

--2010--

Bustos A., Castejon F., Fernandez L.A. , Garcia J. et al. - "Impact of 3D features on ion collisional transport in ITER". Nuclear Fusion 50(12), 2010. Link

--2009--

Velasco J.L., Castejon F., Tarancon A. - "Finite orbit width effect in ion collisional transport in TJ-II". Phys. Plasma 16, 2009. Link

--2008--

Castejon F., Serrano F. et al. - "Fusion Plasma Simulation in the Interactive Grid". Computing and Informatics 27, 2008. Link

 

 

Progetto "MATERIALES"

--2012--

Fernandez L.A., Gordillo-Guerrero A., Martin-Mayor V., Ruiz Lorenzo J.J. - "Numerical test of the Cardy-Jacobsen conjecture in the site-diluted Potts model in three dimensions". Physical Review B 86, 2012. Link

 


Progetto "NEUROSIM"

--2012--

Cruz V.L., Ramos J., Martinez-Salazar J. - "Assessment of the Intrinsic Conformational Preferences of Dipeptide Amino Acids in Aqueous Solution by Combined Umbrella Sampling/MBAR Statistics. A Comparison with Experimental Results". J. Phys. Chem. B 116(1), 2012. Link

--2011--

Cruz V.L., Ramos J., Martinez-Salazar J. - "Water-Mediated Conformations of the Alanine Dipeptide as Revealed by Distributed Umbrella Sampling Simulations, Quantum Mechanics Based Calculations, and Experimental Data". J. Phys. Chem. B 115(16), 2011. Link

 


Progetto "PRISIONER DILEMMA"

--2012--

Gracia Lazaroa C., Ferrer A., Ruiz G. et al. - "Heterogeneous networks do not promote cooperation when humans play a Prisoner’s Dilemma",  PNAS 109(32), 2012. Link

 


Progetto "SANIDAD"

--2011--

Ramos Garcia L.I., Almansa J.F. - "Technical Note: An algorithm to calculate the tissue phantom ratio from depth dose in radiosurgery", Medical Phisics 38(5), 2011. Link

 


SU/UP

lattice

Lattice Project

 

2017 - 2015 - 2014 - 2013 - 2011 - 2010 - 2009 - 2008 - 2007 - 2005

 

--2017--

Regier J.C., Mitter C., "Further progress on the phylogeny of Noctuoidea (Insecta: Lepidoptera) using an expanded gene sample". Systematic Entomology 42(1). Link

--2015--

Bazinet A. - "Computational Methods to Advance Phylogenomic Workflows". Phd Thesis, 2015. Link

Bazinet A.L., Cummings M.P. - "Subdividing Long-Running, Variable-Length Analyses Into Short, Fixed-Length BOINC Workunits". Jour of Grid Comput 13(2). Link

--2014--

Bazinet A.L., Zwickl A., Cummings M. - "A Gateway for Phylogenetic Analysis Powered by Grid Computing Featuring GARLI 2.0". Systematic Biology 63(5). Link

--2013--

Bazinet A.L., Cummings M.P. - "Can RNA-Seq Resolve the Rapid Radiation of Advanced Moths and Butterflies (Hexapoda: Lepidoptera: Apoditrysia)? An Exploratory Study". PloS One 8(12). Link

Lloyd M.W., Campbell L., Neel M.C. - "The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods". Plos One 8(5). Link

--2011--

Bazinet A.L., Cummings M.P. - "Computing the Tree of Life: Leveraging the Power of Desktop and Service Grids". IEEE International Sympos on Parallel and Distribuited Processing. Link

--2010--

Regier J.C., Zwick A., Cummings M.P. et al. - "Validating the Systematic Position of Plationus Segers, Murugan (Rotifera: Brachionidae) Using Sequences of the Large Subunit of the Nuclear Ribosomal DNA and of Cytochrome C Oxidase". Hydrobiologia 644(1). Link

Bazinet A.L. - "The Lattice Boinc Project - Public Computing for the Tree of Life". 6th Boinc Workshop. Link

--2009--

Bazinet A.L. - "The Lattice Project: A Multi-model Grid Computing System". PHD Thesis. Link

Regier J.C., Zwick A., Cummings M.P. et al. - "Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study". BMC Evolutionary Biology 9. Link

--2008--

Bazinet A.L., Cummings M.P. - "The Lattice Project: a Grid research and production environment combining multiple Grid computing models". Grid Computing for Bioinformatics and Computational Biology Book. Link

Cummings M.P. - "BOINC as Part of a Comprehensive, Multi-resource Grid Computing System". 1st East Coast Boinc Meeting. Link

Myers D.S., Bazinet A.L., Cummings M.P. -"Expanding the reach of Grid computing: combining Globus and BOINC-based systems". Grid Computing for Bioinformatics and Computational Biology Book. Link

--2007--

Lee S., Wang T.D., Hashmi N., Cummings M.P. - "Bio-STEER: A Semantic Web workflow tool for Grid computing in the life sciences". Future Generation Computer Systems 23(3). Link

Bazinet, AL, Myers DS, Fuetsch J, Cummings MP. - "Grid Services Base Library: A high-level, procedural application programming interface for writing Globus-based Grid services". Future Generation Computer Systems 23(3). Link

--2005--

Cummings M.P., Huskamp J.C. - "Grid computing". Educause Review 40(116–17). Link


SU/UP

leiden

Leiden

 

--2012--

Van der Meij D. - "Can a computer melt impure Gold - A dynamics simulation". LO3 Project Poster Leiden Univ., 2012. Link

Van der Geest M., Pavanello M. - " Thermodynamics of organic polymers from molecular dynamics simulations". LO3 Project Poster Leiden Univ., 2012. Link

Wijzenbroek L., Somers M.F., - "Static surface temperature effects on the dissociation of H2 and D2 on Cu(111)". Journal Chemical Phys. 137, 2012. Link

--2011--

Hanselman S., Diederen T. - "Melting point analysis for an FCC copper crystal using classical dynamics". LO1 Project Leiden Univ., 2011. Link

--2008--

Diaz C., Somers M.F. - "Application of Desktop Grid in Surface Science". Distributed & Grid Computing-Science Made Transparent for Everyone, RechenKraft, 2008. Link

Somers M.F. - "Leiden Classical, more than just a Boinc Project". 2nd Almeregrid Experience Workshop, 2008. Link

--2007--

Bouma H., Van Der Wijst H. - "The density maximum of water". Preuniv 2007. Link

Somers M.F. - "Dissociation of H2 molecules at a CU(111) surface using quasi-classical calculations". LO1 Project Leiden Univ., 2007. Link

 


SU/UP

 malaria

MalariaControl

 

2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008

 

--2016--

Penny M.A., Verity R., Bever C.A. et al. - "The public health impact and cost-effectiveness of malaria vaccine RTS,S/AS01: a systematic comparison of predictions and four mathematical models". Lancet 387. Link

--2015--

Penny M.A., Maire N., Bever C.A. et al. - "Distribution of malaria exposure in endemic countries in Africa considering country levels of effective treatment". Malar J 14. Link

Pemberton-Ross P., Smith T.A. et al. - "Age-shifting in malaria incidence as a result of induced immunological deficit: a simulation study". Malaria J. 14(287). Link

Penny M.A., Galactionova K. et al. - "The public health impact of malaria vaccine RTS,S in malaria endemic Africa: country-specific predictions using 18 month follow-up Phase III data and simulation models". BCM Medicine 13(170). Link

--2014--

Stuckey E.M., Stevenson J., Galactionova K. et al. - "Modeling the Cost Effectiveness of Malaria Control Interventions in the Highlands of Western Kenya". Plos One 9(10). Link

--2013--

Briet O.J.T., Penny M.A., Hardy D. et al. - "Effects of pyrethroid resistance on the cost effectiveness of a mass distribution of long-lasting insecticidal nets: a modelling study".  Malaria Journal 12:77. Link

--2012--

Crowell V., Hardy D., Briet O., Chitnis N., Maire N., Smith T. - "Can we depend on case management to prevent re-establishment of P. falciparum malaria, after local interruption of transmission?". Epidemics 4. Link

Briet O.J.T., Hardy D., Smith T.A. - "Importance of factors determining the effective lifetime of a mass, long-lasting, insecticidal net distribution: a sensitivity analysis". Malaria Journal 11:20. Link

Smith T., Ross A., Maire M., Chitnis N., Studer A., et al. - "Ensemble Modeling of the Likely Public Health Impact of a Pre-Erythrocytic Malaria Vaccine". PLoS Med 9(1). Link

Maire N., Shilcutt S.D., WalkerM D.G., Tediosi F., Smith T.A. - "Cost-Effectiveness of the Introduction of a Pre-Erythrocytic Malaria Vaccine into the Expanded Program on Immunization in Sub-Saharan Africa: Analysis of Uncertainties Using a Stochastic Individual-Based Simulation Model of Plasmodium falciparum Malaria". Value in Health 14. Link

Brooks A., Briet O.J.T., Hardy D., Steketee R., Smith T.A. - "Simulated Impact of RTS,S/AS01 Vaccination Programs in the Context of Changing Malaria Transmission". PLoS ONE 7(3). Link 

--2011--

Ross A., Maire N., Sicuri E., Smith T.A., Conteh L. - "Determinants of the Cost-Effectiveness of Intermittent Preventive Treatment for Malaria in Infants and Children". PLoS ONE 6(4). Link

Smith T.A., Chitnis N.,Briet O.J.T., Tanner M. - "Uses of mosquito-stage transmission-blocking vaccines against Plasmodium falciparum". Trends Parasitol. 27(5). Link

Bretscher M.T., Maire N., Chitnis N., Felger I., Owusu-Agyei S., Smith T.A. - "The distribution of Plasmodium falciparum infection durations". Epidemics 3. Link

--2010--

Krebs V. - "Motivations of cybervolunteers in an applied distributed computing environment: MalariaControl.net as an example". First Monday Journal 15(2), 2010. Link

N. Chitnis,A. Schapira,Smith T.A.,R. Steketee, "Comparing the effectiveness of malaria vector-control interventions through a mathematical model". J. Am. Trop. Med. Hyg. 83(2). Link

Carneiro I., Smith L., Ross A., Roca-Feltrer A., Greenwood B et al. - "Intermittent preventive treatment for malaria in infants: a decision-support tool for sub-Saharan Africa". Bulletin of the World Health Organization. Link

Ross A., Smith T.A. - "Interpreting malaria age-prevalence and incidence curves: a simulation study of the effects of different types of heterogeneity". Malaria Journal 9(132). Link

--2009--

Tediosi F., Maire N., Penny M.A., Studer A., Smith T.A. - "Simulation of the cost-effectiveness of malaria vaccines". Malaria Journal 8(127). Link

Gosoniu L., Vounatsou P., Sogoba P., Maire N., Smith T. - "Mapping malaria risk in West Africa using a Bayesian nonparametric non-stationary model". Computational Statistics and Data Analysis 53. Link

Maire N. - "Estimating parameters for mathematical models of malaria epidemiology". 5th Boinc Workshop. Link

--2008--

Penny M.A., Maire N., Studer A., Schapira A., Smithm T.A. - "What Should Vaccine Developers Ask? Simulation of the Effectiveness of Malaria Vaccines". PLoS ONE 3(9). Link

Ross A., Penny M., Maire N., Studer A., Carneiro I., et al. - "Modelling the Epidemiological Impact of Intermittent Preventive Treatment against Malaria in Infants". PLoS ONE 3(7). Link

Smith T.A., Maire N., Ross A., Penny M., Chitnis N., et al. - "Towards a comprehensive simulation model of malaria epidemiology and control". Parasitology 13. Link


SU/UP

magnetism

Magnetism@Home


Metlov K.L. - "Magnetization patterns in ferromagnetic nano-elements as functions of complex variable". Physic Rev. Lett. 105, 2010. Link


SU/UP

nanohive

NanoHive@Home

 

--2011--

Allis D.G., Helfrich B., Freitas R.A. et al. - "Analysis of Diamondoid Mechanosynthesis Tooltip Pathologies Generated via a Distributed Computing Approach". Journal of Computational and Theoretical Nanoscience 8, 2011. Link

--2008--

Helfrich B. - "NanoHive@Home - NanoSystems Simulation". Distributed & Grid Computing - Science Made Transparent for Everyone Book, 2008. Link

 


SU/UP

NetMax

 

--2015--

Kurochkin I. - "Adaptation of a conveyor processing method for the distributed computing on the BOINC platform". Proceeding of Boinc:Fast, 2015. Link

--2014--

Kurochkin I. - "NetMax@Home. The project of the voluntary distribuited computing". 6th Int. Conf. of Distribuited Computing and Grid Tech in Science and Educ, 2014. Link

 


SU/UP

 

Neurona@Home

 

--2015--

Acedo L., Lamprianidou E. et al. - "Firing patterns in a random network cellular automata model of the brain". Physica A: Statistical Mechanics and it's Applications 435, 2015. Link

--2013--

Acedo L., Villanueva-Oller J., Morano J.A. - "The Neurona@Home project: Simulating a large-scale cellular automata brain in a distributed computing environment". AIP Conference 1510(1), 2013. Link

 


SU/UP

 nrg

NRG@Home

 

--2015--

Samish I., Bourne P.E., Najmanovich R. - "Achievements and challenges in structural bioinformatics and computational biophysics". Bioinformatics 31(1), 2015. Link

Gaudreault F, Najmanovich R. - "FlexAID: Revisiting docking on non native-complex structures". J Chem Inf Model 55(7), 2015. Link

--2014--

Duchene D., Colombo E, Najmanovich R. et al. - "Analysis of Subpocket Selectivity and Identification of Potent Selective Inhibitors for Matriptase and Matriptase-2". Jour of Chem Medicine 57, 2014. Link

Naimanovich R.J., Samish I., Bourne P. - "Achievements and challenges in structural bioinformatics and computational biophysics". Bioinformatics Btu769, 2014. Link

 

 


SU/UP

 Oproject

 

Swierczewski L. - "The Distributed Computing Model Based on The Capabilities of The Internet". Arxiv, 2012. Link

 


SU/UP

Optima@Home

 

2017 - 2015 - 2014 - 2013 - 2011 - 2010 - 2005

 

--2017--

Kurochkin I., Afanasiev, A. P. - "The voluntary distributed computing project Optima@home". Science. Business. Society. 2(2), 2017. Link

Kurochkin I. - "The Umbrella Project of Voluntary Distributed Computing Optima@home". Proceeding of Boinc:Fast 2017. Link

--2015--

Andrey Fomin, Yuri Orlov, Mikhail Posypkin,  "Using Simulation to Study Performance of Parallel Tree Search Scheduler". Proceedings of Optimization and Applications (OPTIMA-2015), 2015. Link

Afanasiev, A. P., Bychkov, I. V., Manzyuk, M. O., "Technology for Integrating Idle Computing Cluster Resources into Volunteer Computing Projects". 5th Int Workshop on Computer Science and Engineering:WCSE 2015-IPCE. Link

--2014--

Afanasiev A., Putilina E. - "The signal recovery by multiple integrals and desktop-grid computing". 5th Inter Conf on Optimization Methods and Applications, 2014. Link

Tian B., Posypkin M.A. - "Efficient implementation of branch-and-bound method on desktop grids". Computer Science 15(3), 2014. Link

--2013--

Tian B., Posypkin M.A. - "BnBTest@HOME - A Distributed implementation of branch and bound method". 4th Int. Conf on Optimization Methods and Algorithms, 2013. Link

--2011--

Kholodkov K.I., Alshin I.M., Koryagin V.N. et al. - "Experience on Deploying a Grid Infrastructure for the Support of Computational Web Services". Scientific and Technical Information Processing 39(2), 2011. Link

Afanasiev A., Oferkin I. et al. - "A Comparative Study of Different Optimization Algorithms for Molecular Docking". 3rd Intern. Workshop on Science Gateways for Life Science (IWSG), 2011. Link

--2010--

Crochemore M., Kubica M., et al. - "Extracting Powers and Periods in a String from its Runs Structure". Lecture Notes in Computer Science 6393, 2010. Link

Sukhoroslov O.V. - "Running Bag-of-Tasks Applications in EGEE with MaWo". 5th EGEE User Forum, 2010. Link

Voloshinov V.V., Smirnov S. - "Error-Free Inversion of Ill-Conditioned Matrices in Distributed Computing System of RESTful-Services of Computer Algebra". 4th Intern. Conf. Distributed Computing and Grid-Technologies in Science and Education, 2010. Link

Neverov V.S., Voloshinov V.V., Afanisev A.P. et al. - "Distributed computing and optimization algorithms for interpretation of x-ray scattering by carbon nanostructures in the deposited films from TOKAMAK ?-10". 4th Intern. Conf. Distributed Computing and Grid-Technologies in Science and Education, 2010. Link

Sukhoroslov O.V. - "On Development of Grid-enabled Applications and Service-Oriented Scientific Environments." 4th Intern. Conf. Distributed Computing and Grid-Technologies in Science and Education, 2010. Link

--2005--

Kolpakov R., Kucherov G. - "Periodic Structures in Words". Encyclopedia of Mathematics and its Applications vol. 104, 2005. Link

 


SU/UP

 

Orbit

Tricarico P. - "The near-Earth asteroid population from two decades of observations". Icarus 284, 2017. Link

 


SU/UP

 

 

Physiome

 

Tomas Kulhanek - "Utilization of GRID technology in processing of medical information". Phd Thesis, 2015. Link

Kulhanek T., Silar J. et al. - "Service based identification of physiological system in desktop grid". Terena Network Conf, 2011. Link

Kulhanek T. - "Modelling and simulation of complex human physiology systems". Terena Network Conf, 2011. Link

Kulhanek T., Silar J. et al. - "Distribuited Computation and Parameter Estimation on Identification of Physiological Systems". VPH 2010. Link

Kulhanek T., Silar J. et al. - "Identification of physiological system - Application of desktop gridsystem Boinc". 2009.
Link

 


SU/UP

poem

Poem@Home

 

--2014--

Girrbach M., Meliciani I., Strunk T. et al. - "A fluorescence polarization assay for the experimental validation of an in silico model of the chemokine CXCL8 binding to receptor-derived peptides". Physical Chemistry Chemical Physics 17, 2014. Link

--2012--

Boeuf S., Strunk T. et al. - "Engineering hydrophobin DewA to generate surfaces that enhance adhesion of human but not bacterial cells". Acta Biomaterialia 8(3), 2012. Link

Strunk T., Wolf M., Wenzel W. - "Peptide structure prediction using distributed volunteer computing networks". J. of Mathematical Chemistry 50, 2012. Link

Strunk T., Wolf M., Wenzel W. et al. - "SIMONA 1.0: An efficient and versatile framework for stochastic simulations of molecular and nanoscale systems". J.of Comput Chem 33, 2012. Link

--2011--

Strunk T., Wenzel W., - "High Throughput peptide structure prediction with distributed volunteer computing networks". CMMSE 2011, 2011. Link

Strunk T., Anand P., Brieg M. et al., "Benchmarking the POEM@HOME Network for Protein Structure Prediction". IWSG, 2011. Link

--2010--

Strunk T., Wolf M., Wenzel W. - "Development and Evaluation of a GPU-optimized N-Body term for the simulation of biomolecules". SimLab@KIT Workshop, 2010. Link

--2009--

I. Meliciani, K. Klenin, Strunk T. - "Probing hot spots on protein-protein interfaces with all-atom free-energy simulation". J. of Chem Phys 131, 2009. Link

--2008--

Strunk T., Meliciani I., Wenzel W. et al., "Free-energy based all-atom protein folding using worldwide distributed computational resources". Computational Biophysics to Systems Biology (CBSB08), 2008. Link

 


SU/UP

pogs

Pogs TheSkyNet

 

--2016--

Chambers K.C., Magnier E.A., Thilker D. et al. - "The PAN-STARRS1 surveys". Instrum. and Meth. for Astrophysics, 2016. Link

--2014--

Thilker D., Vinsen K. - "Early science from the Pan-STARRS1 Optical Galaxy Survey (POGS): Maps of stellar mass and star formation rate surface density obtained from distributed-computing pixel-SED fitting". AAS Meeting #223, 2014. Link

--2013--

Vinsen K., Thilker D. - "A BOINC based, citizen-science project for pixel spectral energy distribution fitting of resolved galaxies in multi-wavelength surveys". Astronomy & Computing 3, 2013. Link

Vinsen K. - "A BOINC based project for Spectral Energy Distribution fitting". Galaxy Zoo Conference, 2013. Link


SU/UP

 

Predictor@Home

 

Taufer M., An C., Kerstens A., Brooks C. - "Predictor@Home: A "Protein Structure Prediction Supercomputer' Based on Global Computing". IEEE Transact on Parallel and Distribuited Systems 17(8), 2006. Link

 


 

primaboinca

Primaboinca

Campos F. - "Parallel and distributed computing in the fields of number theory". 2012. Link

 


SU/UP

 

Proteins@Home

 

--2010--

Busch M.S., Sedano A., Simonson T. - "Computational protein design: validation and possible relevance as a tool for homology searching and fold recognition". PloS One 5(5), 2010. Link

--2009--

Busch M.S., Mignon D, Simonson T. - "Computational protein design as a tool for fold recognition". Proteins 77(1), 2009. Link

--2008--

Busch M.S., Lopes A., Mignon D, Simonson T. - "Computational protein design: Software implementation, parameter optimization, and performance of a simple model". J. Comput. Chem. 29(7), 2008. Link

Busch M.S., Lopes A., Amara N. et al. - "Testing the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design". Bioinformatics 9, 2008. Link

 

 


SU/UP

 

PucBi

 

Sjaugi M.F., Tan S. et al. - "g-FLUA2H: a web-based application to study the dynamics of animal-to-human mutation transmission for influenza viruses". BMC Medical Genomics 8(4), 2015. Link

 


SU/UP

 

RectilinearCrossingNumber

 

Kornbergher B. - "Distribuited Computing for Problems from Combinatorial Geometry". Phd Thesis, 2005. Link

 


SU/UP

RenderFarm


Kaukonen J. - "Renderfarm.fi: Making movies with a screensaver". 7th Boinc Workshop, 2011. Link

Seppala H., Suomalainen N. - "Integrating open source distributed rendering solutions in public and closed networking environments". Laurea Thesis, 2010. Link

 


SU/UP

 

Riojascience

 

Martinez R., Enriquez P.A. et al. - "Dynamics of the O(3P) + CH4 ? OH + CH3 Reaction Is Similar To That of a Triatomic Reaction". J. Phys. Chem. A 116(21), 2012. Link

 


SU/UP

sat

Sat@Home

 

2019 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011

 

--2019--

Zaikin O. - "SAT-based cryptanalysis: from parallelcomputing to volunteer computing". Russian SC Days, 2019. Link

--2017--

Afanasyev A., Zaikin O. et al. - "Concept of a multitask grid system with a flexible allocation of idle computational resources of supercomputers". J of Comp and Syst Science Intern 56, 2017. Link

Zaikin O., Semenov A. et al. - "A Volunteer-Computing-Based Grid Architecture Incorporating Idle Resources of Computational Clusters". Lecture notes in Comp Science, 2017. Link

--2016--

Zaikin O., Semenov A. et al. - "Estimations of cryptographic resistance of ciphers in the Trivium family to SAT-based cryptanalysis". Prikl. Diskr. Mat. Suppl 9, 2016. Link

Zaikin O., Zhuravlev A. et al. - "On the Construction of Triples of Diagonal Latin Squares of Order 10". Discrete Math Days Barcelona, 2016. Link

Semenov A., Zaikin O. - "SAT-based search for systems of diagonal latin squares in volunteer computing project SAT@home". 39th Conf of Inter and Commun Tech, Electr and Microelectr (MIPRO), 2016. Link

Semenov A., Zaikin O. - "Algorithm for finding partitionings of hard variants of boolean satisfiability problem with application to inversion of some cryptographic functions". SpringerPlus 5(554), 2016. Link

--2015--

Zaikin O., Semenov A. - "Solving weakened cryptanalysis problems for the Bivium cipher in the volunteer computing project SAT@home". Inter J of Open Infor Tech 3(12), 2015. Link

Afanasyev A. - "What kinds of problems are suitable to be solved by desktop grid environment?". Proceeding of Boinc:Fast, 2015. Link

Zaikin O., Semenov A., Otpuschennikov I. - "Solving Weakened Cryptanalysis Problems for the Bivium Keystream Generator in the Volunteer Computing Project SAT@home". Proceeding of Boinc:Fast, 2015. Link

Zaikin O., Kochemazov S. - "The Search for Systems of Diagonal Latin Squares Using the SAT@home Project". Proceeding of Boinc:Fast, 2015. Link

Semenov A., Zaikin O. - "Using Monte Carlo Method for Searching Partitionings of Hard Variants of Boolean Satisfiability Problem". Proceeding of PaCT 2015 (Lecture Notes in Computer Science 9251). Link

--2014--

Manzyuk M., Zaikin O. - "Tool for utilizing idle resources of computing clusters in volunteer computing". 6th Int. Conf. "Distributed Computing and Grid-Technologies in Science and Educations", 2014. Link

Zaikin O., Semenov A. - "Solving weakened cryptanalysis problems of Bivium cipher in the volunteer project SAT@home".
6th Int. Conf. "Distributed Computing and Grid-Technologies in Science and Educations", 2014. Link

Semenov A., Zaikin O., Otpuschennikov I. - "Using Volunteer Computing for Mounting SAT-based Cryptographic Attacks". Submitted. Link

--2013--

Semenov A.,Zaikin O. - "On estimating total time to solve SAT in distributed computing environments: Application to the SAT@home project". 16th International Conference SAT, 2013. Link

--2012--

Posypkin M.,Semenov A.,Zaikin O. - "Using BOINC desktop grid to solve large scale SAT problems". Computer Science 13(1), 2012. Link

Zaikin O. - "SAT@Home Experience". Grid 2012. Link

--2011--

Posypkin M.,Semenov A.,Zaikin O. - "Parallel algorithms for SAT in application to inversion problems of some discrete functions", CoRR (2011). Link

Posypkin M.,Semenov A.,Zaikin O. - "Parallel Logical Cryptanalysis of the Generator A5/1 in BNB-Grid System". Lecture Notes in Computer Science 6873, 2011. Link

 

SU/UP

 

 Screensaver Lifesaver

 

Richards W.G. - "Virtual screening using grid computing: the screensaver project". Nature Reviews Drug Discovery 1(7), 2002. Link

Richards W.G., Davies E.K. et al. - "Pattern recognition and massively distributed computing". J of Computational Chemistry 23(16), 2002. Link


SU/UP

 

Simap@Home

 

--2014--

Arnold R., Goldenberg F., Mewes H.W., Rattei T. - "SIMAP The database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage". Nucleic Acids Res. 42, 2014. Link

--2011--

Navonil M. - "Distributed computing and modeling simulation: Speeding up simulations and creating large models". Proc of Winter Simul Confer, 2011. Link

--2010--

Rattei T., Tischler P., Götz S., Jehl M.A., Hoser J., et al. - "SIMAP A comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters". Nucleic Acids Res. 38, 2010. Link

--2008--

Rattei T., Tischler P., Arnold R., Hamberger F., Krebs J., et al. - "SIMAP Structuring the network of protein similarities". Nucleic Acids Res. 36, 2008. Link

--2006--

Arnold R., Rattei T., Tischler P., Truong M.D., Stümpflen V., Mewes W. - "SIMAP The similarity matrix of proteins". Nucleic Acids Res. 34, 2006. Link

 


SU/UP

spinhenge

Spinhenge@Home

 

--2009--

Powell G., Engelhardt L., Schroder C., Hilbig T. - "How to use 100,000 PCs for studying magnetism". 76th Meeting of American Physical Society 54(16), 2009. Link

--2008--

Rainey C., Engelhardt L., Schroder C., Hilbig T. - "QMC Goes BOINC: Using Public Resource Computing to Perform Quantum Monte Carlo Calculations". 75th Meeting of American Physical Society 53(13), 2008. Link

Schröder C., Prozorov R., Kögerler P., Vannette M.D. et al. - "Multiple nearest-neighbor exchange model for the frustrated Keplerate magnetic molecules Mo72Fe30 and Mo72Cr30". Phys. Rev. B, 2008. Link

--2007--

Schröder C. - "The world is not enough! Spin dynamics simulations for magnetic nanostructures on a global scale". PhD Phys Presentation Univ of Osbabruck, 2007. Link

 


SU/UP

superlink

Superlink@technion

 

--2011--

Silberstein M. - "Building an online domain-specific computing service over non-dedicated grid and cloud resources: the Superlink-online experience". 11th Intern Sympos on Cluster, Cloud and Grid Compu, 2011. Link

Silberstein M. - "Building online computing service over volunteer grid resources". Parall and Distrib Workshp IPDPSW, 2011. Link

--2009--

Silberstein M., Sharov A. et al. -"GridBot: Execution of Bags of Tasks in Multiple Grids". IEEE Conf on Comp Analysis, 2009. Link

--2008--

Silberstein M., Sharov A., Schuster A. et al. - "Superlink-Online. A distribuited System for Genetic Linkage Analysis using EGEE and Boinc". EGEE Forum, 2008. Link

--2007--

Silberstein M., Geiger D., Schuster A. - "A Distributed System for Genetic Linkage Analysis". Lecture Notes in Computer Science 4360, 2007. Link

 

 


SU/UP

 staky

Sztaki@Home

SU/UP

 

2019 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2006

 

--2019--

Temelkovski D. - "Conceptual Framework and Methodology for Analysing Previous Molecular Docking Results". Phd Thesis, 2019. Link

--2017--

Temelkovski D., Kiss T. et al. - "Molecular docking with Raccoon2 on clouds: extending desktop applications with cloud computing". IWSG 2017. Link
Temelkovski D. - "Conceptual Framework and Methodology for Analysing Previous Molecular Docking Results". Phd Thesis, 2019. https://westminsterresearch.westminster.ac.uk/download/e580d3f467913dcdf7063b2d4afac3fcd04ce7fb11b628e0dffaa9cdd79762d9/6171238/thesis2019-04-30_amended.pdf

Tihanyi N., Kovacs A., Kovacs J. - "Computing Extremely Large Values of the Riemann Zeta Function". J of Grid Comput 15(4), 2017.Link

--2016--

Marosi A., Kacsuk P. - "Volunteer Clouds: From Volunteer Computing to Interconnected Infrastructures". Develop Interop and Feder Cloud Archit Book, 2016. Link

--2015--

Kacsuk P., Farkas Z., Kovacs J. et al. - "Desktop grid in era of Cloud Computing". Grid Computing: Techniques and Future Prospects, 2015. Link

Marosi A., Lovas R. - "Defining volunteer computing: a formal approach". Computer Research and Modeling 7(3), 2015. Link

Marosi A., Kacsuk P. et al. - "Brokering Solution for Science Gateways using Multiple Distributed Computing Infrastructures". 7th Int Workshop on Science Gateways, 2015. Link

--2014--

Marosi A. - "SZTAKI Desktop Grid". IGDF Technical Meeting, 2014. Link

Taylor S.J.E, Ghorbani M. et al. - "Investigating the speedup of systems biology simulation using the Sztaki desktop grid". Winter Simul Confer, 2014. Link

--2013--

Gordienko Y., Bekenov L. et al. - "Complex Workflow Management and Integration of Distributed Computing Resources by Science Gateway Portal for Molecular Dynamics Simulations in Materials Science". 3th Intern Confer "HPC-UA", 2013. Link

Micsik A., Pallinger P. et al. - "Using the BonFIRE Testbed for Testing Scalability of the KOPI Service". ERCIM News 95, 2013. Link

Kiss A.K. - "Loopholes of Plagiarism Detection Software". Procedia-Social and Behavioral Science 106, 2013. Link

Pataki M,, Marosi A. - "Searching for translated plagiarism whit the help of desktop grids". J of Grid Comp 11(1), 2013. Link

Kovacs A., Tihanyi N. - "Efficient computing of n-dimensional simultaneous Diophantine approximation problems". Acta Univ. Sapientiae Informatica 5, 2013. Link

Tihanyi N. - "10305 peak values of the Riemann-Siegel Z function where Z(t) >500". Acta Univ. Sapientiae Informatica 5, 2013. Link

--2012--

Marosi A., Kacsuk P. -"Utilizing the Power of Desktop Grid Systems by Web 2.0 Communities". Infocommun Journ, 2012. Link

--2011--

Gordienko Y.G. - "Change of Scaling and Appearance of Scale-Free Size Distribution in Aggregation Kinetics by Additive Rules". Physica A: Statistical Mechanics and Applications, 2011. Link

Kovacs A., Kacsuk P. - "Using a private desktop grid system for accelerating drug discovery". Future Generation Computer System 27(6), 2011. Link

--2010--

Odor G., "Surface pattern formation and scaling described by conserved lattice gases". Physical Review E 81, 2010. Link

Marosi A., Odor G. - "Exploring University Classes in Nonequilibrium Systems on SZTAKI Desktop Grid". 3rd Almeregrid Workshop, 2010. Link

--2009--

Kacsuk P., Kovacs J. et al. - "SZTAKI Desktop Grid (SZDG): A Flexible and Scalable Desktop Grid System". J. of Grid Computing 7(4), 2009. Link

Odor G., Liedke B. et al. - "Mapping of 2+1 dimensional KPZ growth onto driven lattice fas model of dimers". Physical Review E 79, 2009. Link

--2008--

Burksi P, Kovacs A. - "Exhaustive search methods for CNS polynomials". Monatshfte fur Mathematik 155(3-4), 2008. Link

--2006--

Kovaks J. - "KOPI Protection instead of Copy Protection". 2nd International Conference on Automated Production of Cross Media Content (Axmedis), 2006. Link

 


SU/UP

tanpaku

Tampaku@Home

 

--2007--

Ando T., Yamato I. - "Brownian Dynamics Approach to Protein Folding". Fronteers of Comput. Science, 2007. Link

--2005--

Ando T., Yamato I. - "Free Energy Landscapes of Two Model Peptides: Beta-Helical and Beta-Hairpin Peptides Explored with Brownian Dynamics Simulation". Molecular Simulation 31(10), 2005. Link

--2004--

Ando T., Meguro T., Yamato I. - "A New Implicit Solvent Model for Brownian Dynamics Simulation: Solvent-Accessible Surface Area Dependent Effective Charge Model". Journal of Computational Chemestry Japan 3(4), 2004. Link

--2003--

Ando T., Meguro T., Yamato I. - "Multiple Time Step Brownian Dynamics for Long Time Simulation of Biomolecules". Molecular Simulation 29(8), 2003. Link

Meguro T., Ando T., Yamato I. - "Development of Multifunctional Object-Oriented Program Library for Molecular Simulation and Structure Analysis". Journal of Computational Chemestry Japan 2(1), 2003. Link

 


SU/UP

 

Terrain

Zhu L., Zeng Z. - "A BOINC based System for Global Topographic Structure Extraction Using SRTM Digital Elevation Models". Geocomput Conf, 2005. Link

 


SU/UP

ufluids

UFluids@Home

 

--2010--

Manning R.E., Collicott S.H. - "Liquid plugs in rectangular channels under a transverse gravity field". 49th AIAA Conference, 2010. Link

--2008--

Braun J.P. - "Zero Gravity Two-Phase Stability Solutions of Droplets in a bent circular cylinder". Master Thesis, 2008. Link

--2006--

Manning R.E. - "Gas Bubble Stability in a Sphere Layer". Master Thesis, 2006. Link

Manning R.E., Collicott S.H. - "Bubble Penetration Through a Single Layer Sphere Bed". 44rd AIAA Conference, 2006. Link


SU/UP

Uspex@Home

 

Khrapov N., Rozen V.V. et al. - "Using virtualization to protect the proprietary material science applications in volunteer computing". Open Eng. 8(1), 2018. Link

Khrapov N., Rozen V.V. et al. -  "Volunteer  Computing for  Computational Materials Design". Lobachevskii Journal of Math 38(5), 2017. Link

Khrapov N., Oganov A. et al. - "Using Virtualization Technology within Volunteer Computing for Computational Material design". Proc of BOINC:FAST, 2017. Link


SU/UP

 

VGTU

 

Ramanauskas M., Starikovicius V. et al. - "Global optimization of grillage-type foundations using a distributed genetic algorithm". J of Global Optim, 2019. Link

Ciegis R., Starikovicius V. - "Application of distributed parallel computing for dynamic visual cryptography". J of Supercomputing 72(6), 2016. Link


SU/UP

 

 virtualpraire

Virtual Prairie

 

--2014--

Bittebière A.K., Garbey M. et al. - "Structural blueprint and ontogeny determine the adaptive value of the plastic response to competition in clonal plants: a modelling approach". Evolutional Ecology 28(3), 2014. Link

Bittebière A.K., Mony C. - "Plant trait responses to fine-scale competitive landscape: evidence of spatio-temporal disintegration". Annals of botany 115(1), 2014. Link

--2013--

Smaoui M., Garbey M. - "Improving volunteer computing scheduling for evolutionary algorithms". Future Generation Comp Syst 29(1), 2013. Link

--2012--

Oborny B., Mony C., Herben T. - "From virtual plants to real communities: a review of modeling clonal growth". Ecological Modelling 234, 2012. Link

--2011--

Garbey M., Smaoui M., et al. - "The Vitual Prairie Project". 2nd International Conference on Parallel, Distributed, Gris and Cloud Computing for Engineering, 2011. Link

Mony C., Garbey M., Smaoui M., Benot M.L. - "Large Scale Parameter Study of an Individual Based Model of Clonal Plant with Volunteer Computing". Ecological Modelling 222, 2011. Link

--2009--

Mony C., & Garbey M. - "Updates on the Virtual Prairie Project". The 5th Pan-Galactic BOINC Workshop, 2009. Link

Smaoui M. & Garbey M. - "Parallel Genetic Algorithm Implementation for BOINC". Parallel Computing: From Multicores and GPU's to Petascale 19, ICPC 2009. Link

--2008--

Smaoui M., Garbey M., & Mony C. - "Virtual Prairie: Going green with volunteer computing". IEEE Asia-Pacific Services Computing Conference, 2008. Link

Garbey M. - "Virtual Prairies with Boinc". The 4th Pan-Galactic BOINC Workshop, 2008. Link

Mony C., Garbey M., & Smaoui M. - "Using modelling to understand clonal strategies in optimal growing conditions". 51st Annual Symposium of the International Association for Vegetation Science, 2008. Link

Garbey M., Mony C. & Smaoui M. - "Fluid flow - agent based hybrid model for the simulation of virtual prairies". Lecture Notes in Computational Science and Engineering 74,(PCFD Conference 2008). Link

 


SU/UP

volpex

VolPex

 

--2018--

Subhlok J., Nguyen H. et al. - "Resilient parallel computing on volunteer PC grids". Concurrency and Computation 30(18), 2018. Link

--2016--

Rahman M.T., Nguyen H., Subhlok J. et al. - "Checkpointing to minimize completion time for Inter-dependent Parallel Processes on Volunteer Grids". CCGrid Conference, 2016. Link

--2015--

Tarikul I., Nguyen H., Subhlok J. - "Efficient Message Logging to Support Process Replicas in a Volunteer Computing Environment". Phd Thesis and Proc. Heterogenous Computing Workshop (HWC), IPDPS 2015. Link

--2012--

Nguyen H., Rohit E., Subhlok J., Gabriel E., Wang Q., M.S. Cheung, Anderson D. - "An Execution Environment for Robust Parallel Computing on Volunteer PC Grids". ICPP 41, 2012. Link

--2011--

Pedamallu E., Nguyen H., Kanna N., Subhlok J., Gabriel E., Wang Q., Cheung M.S., Anderson D. - "A Robust Communication Framework for Parallel Execution on Volunteer PC Grids". 11th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing (CCGrid 2011). Link

--2010--

Anand R., Gabriel E, Subhlok J. - "Communication Target Selection for Replicated MPI Processes". The 17th EuroPVM/MPI 2010 Conference, 2010. Link

Subhlok J. - "Virtual Cluster based Parallel Computing on Volunteer Nodes". 4th Work on Desktop Grids (PCGrid), 2010. Link

Nguyen H. - "VolpeX Status Report". 6th Boinc Workshop, 2010. Link

Leblanc T., Subhlok J., Gabriel E. - "A High-Level Interpreted MPI Library for Parallel Computing in Volunteer Environments". 4th Workshop on Desktop Grids and Volunteer Computing Systems, 2010. Link

--2009--

LeBlanc T. - "Design and Evaluation of a Communications Library for Volunteer Computing Environments". PhD Thesis, 2009. Link

Subhlok J. - "Volpex Communication for Volunteer Computing". 5th Boinc Workshop, 2009. Link

Kanna N., Subhlok J., Gabriel E., Rohit E., Anderson D. - "A Communication Framework for Fault-tolerant Parallel Execution". 22nd Annual Workshop on Languages and Compilers for Parallel Computing, 2009. Link

LeBlanc T., Anand R., Gabriel E., Subhlok J. - "VolpexMPI: an MPI Library for Execution of Parallel Applications on Volatile Nodes". 16th EuroPVM/MPI Conference, 2009. Link

--2008--

Subhlok J. - "Inter-Task Communication on Volatile Nodes". 4th Boinc Workshop, 2008. Link

 


SU/UP

VRS@Home

 

Acedo L., Morano J.A., Villanueva-Oller J., Villanueva R.J. - "Using random networks to study the dynamics of respiratory syncytial virus (RSV) in the Spanish region of Valencia". Mathem Models of Addictive Behav, Med&Engin 54(7-8), 2011. Link

 


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